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Bioinformatics
- EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats
- A self-updating road map of The Cancer Genome Atlas
- HAL: a hierarchical format for storing and analyzing multiple genome alignments
- Effectively addressing complex proteomic search spaces with peptide spectrum matching
- TfReg: calculating DNA and RNA melting temperatures and opening profiles with mesoscopic models
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BMC Bioinformatics
- Calcium (Ca2+) waves data calibration and analysis using image processing techniques
- Efficient algorithms for biological stems search
- Disk-based k-mer counting on a PC
- MIMO: an efficient tool for molecular interaction maps overlap
- Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient
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Computers in Biology and Medicine
- pubmed: "computers in biolog...
- An IVUS image-based approach for improvement of coronary plaque characterization.
- In silico prediction of spleen tyrosine kinase inhibitors using machine learning approaches and an optimized molecular descriptor subset generated by recursive feature eliminationmethod.
- Study on simple reaction and choice times in patients with type I diabetes.
- Characterising non-linear dynamics in nocturnal breathing patterns of healthy infants using recurrence quantificationanalysis.
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Journal of Biomedical Informatics
- pubmed: "journal of biomedic...
- An Enhanced CRFs-based System for Information Extraction from Radiology Reports.
- SNOMED CT module-driven clinical archetype management.
- The Analytic Information Warehouse (AIW): a Platform for Analytics using Electronic Health Record Data.
- Efficient Computation Of Interacting Model Systems.
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PLoS Computational Biology
- The Impact of a Ligand Binding on Strand Migration in the SAM-I Riboswitch
- Quantifying the Molecular Origins of Opposite Solvent Effects on Protein-Protein Interactions
- Hybrid Equation/Agent-Based Model of Ischemia-Induced Hyperemia and Pressure Ulcer Formation Predicts Greater Propensity to Ulcerate in Subjects with Spinal Cord Injury
- Polymorphisms in the F8 Gene and MHC-II Variants as Risk Factors for the Development of Inhibitory Anti-Factor VIII Antibodies during the Treatment of Hemophilia A: A Computational Assessment
- Multiple Estimates of Transmissibility for the 2009 Influenza Pandemic Based on Influenza-like-Illness Data from Small US Military Populations
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